Tuesday, July 27, 2010

3D MACROMOLECULE




Praise to Allah because I get opportunity to meet again.

Today i would like to introduce to you structure of the outer membrane complex of a type IV secretion system. Alhamdulillah because Allah S.W.T had created it so beautiful and good.

Let's look to the structure by using RasWin software.


(first view)
This core consists of 14 copies of each of the proteins and forms two layers, the I and O layers, inserting in the inner and outer membrane, respectively. Here we present the crystal structure of a ~0.6MDa outer-membrane complex containing the entire O layer. This structure is the largest determined for an outer-membrane channel and is unprecedented in being composed of three proteins.

Authors:

Chandran,V. , Fronzes, R. , Duquerroy, S. , Cronin, N. , Navaza, J , Waksman, J.

Molecular description :

Classification: Transport protein.

Structure weight: 606128.20

Molecule: TraF protein.

Polymer: 1

Length: 227

Chains: A,D,G,J,M,P,S,V,Y,b,e,h,k,n

Fragment:TraF C-terminal domain, UNP residues 160-386

Molecule: TraO protein.

Polymer: 2

Length: 135

Chains: B,E,H,K,N,QT,W,Z,c,f,i,l,o

Fragment:TraO C-terminal domain, UNP residues 160-294

Molecule: TraN protein.

Polymer: 3

Length: 34

Chains: C,F,I,L,O,R,U,X,a,d,g,j,m,p

Fragment:UNP residues 15-49

(second view)

Organism:

Polymer: 1

Scientific name: Escherichia coli

Polymer: 2

Scientific name: Escherichia coli

Polymer: 3

Scientific name: Escherichia coli

(third view)

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